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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| HMM.c | 2024-11-19 19:50 | 18K | |
| HMM.c.pysam.c | 2024-11-19 19:50 | 18K | |
| HMM.h | 2024-11-19 19:50 | 4.9K | |
| LICENSE | 2024-11-19 19:50 | 39K | |
| README | 2024-11-19 19:50 | 2.1K | |
| abuf.c | 2024-11-19 19:50 | 31K | |
| abuf.c.pysam.c | 2024-11-19 19:50 | 31K | |
| abuf.h | 2024-11-19 19:50 | 2.5K | |
| bam2bcf.c | 2024-11-19 19:50 | 46K | |
| bam2bcf.c.pysam.c | 2024-11-19 19:50 | 46K | |
| bam2bcf.h | 2024-11-19 19:50 | 7.9K | |
| bam2bcf_iaux.c | 2024-11-19 19:50 | 28K | |
| bam2bcf_iaux.c.pysam.c | 2024-11-19 19:50 | 28K | |
| bam2bcf_indel.c | 2024-11-19 19:50 | 34K | |
| bam2bcf_indel.c.pysam.c | 2024-11-19 19:50 | 34K | |
| bam_sample.c | 2024-11-19 19:50 | 13K | |
| bam_sample.c.pysam.c | 2024-11-19 19:50 | 13K | |
| bam_sample.h | 2024-11-19 19:50 | 2.0K | |
| bcftools.h | 2024-11-19 19:50 | 5.1K | |
| bcftools.pysam.c | 2024-11-19 19:50 | 1.6K | |
| bcftools.pysam.h | 2024-11-19 19:50 | 1.8K | |
| bin.c | 2024-11-19 19:50 | 3.4K | |
| bin.c.pysam.c | 2024-11-19 19:50 | 3.4K | |
| bin.h | 2024-11-19 19:50 | 2.1K | |
| call.h | 2024-11-19 19:50 | 5.2K | |
| ccall.c | 2024-11-19 19:50 | 13K | |
| ccall.c.pysam.c | 2024-11-19 19:50 | 13K | |
| cigar_state.h | 2024-11-19 19:50 | 6.6K | |
| cols.c | 2024-11-19 19:50 | 3.3K | |
| cols.c.pysam.c | 2024-11-19 19:50 | 3.3K | |
| cols.h | 2024-11-19 19:50 | 1.8K | |
| config.h | 2024-11-19 19:50 | 77 | |
| consensus.c | 2024-11-19 19:50 | 50K | |
| consensus.c.pysam.c | 2024-11-19 19:50 | 50K | |
| convert.c | 2024-11-19 19:50 | 66K | |
| convert.c.pysam.c | 2024-11-19 19:50 | 66K | |
| convert.h | 2024-11-19 19:50 | 1.9K | |
| csq.c | 2024-11-19 19:50 | 142K | |
| csq.c.pysam.c | 2024-11-19 19:50 | 142K | |
| dbuf.h | 2024-11-19 19:50 | 1.8K | |
| dist.c | 2024-11-19 19:50 | 3.3K | |
| dist.c.pysam.c | 2024-11-19 19:50 | 3.4K | |
| dist.h | 2024-11-19 19:50 | 2.8K | |
| em.c | 2024-11-19 19:50 | 8.7K | |
| em.c.pysam.c | 2024-11-19 19:50 | 8.8K | |
| extsort.c | 2024-11-19 19:50 | 7.8K | |
| extsort.c.pysam.c | 2024-11-19 19:50 | 7.8K | |
| extsort.h | 2024-11-19 19:50 | 2.1K | |
| filter.c | 2024-11-19 19:50 | 143K | |
| filter.c.pysam.c | 2024-11-19 19:50 | 143K | |
| filter.h | 2024-11-19 19:50 | 3.0K | |
| gff.c | 2024-11-19 19:50 | 42K | |
| gff.c.pysam.c | 2024-11-19 19:50 | 42K | |
| gff.h | 2024-11-19 19:50 | 13K | |
| gvcf.c | 2024-11-19 19:50 | 7.9K | |
| gvcf.c.pysam.c | 2024-11-19 19:50 | 8.0K | |
| gvcf.h | 2024-11-19 19:50 | 1.5K | |
| hclust.c | 2024-11-19 19:50 | 12K | |
| hclust.c.pysam.c | 2024-11-19 19:50 | 13K | |
| hclust.h | 2024-11-19 19:50 | 2.7K | |
| hex.h | 2024-11-19 19:50 | 3.0K | |
| khash_str2str.h | 2024-11-19 19:50 | 3.1K | |
| kheap.h | 2024-11-19 19:50 | 7.5K | |
| kmin.c | 2024-11-19 19:50 | 7.1K | |
| kmin.c.pysam.c | 2024-11-19 19:50 | 7.1K | |
| kmin.h | 2024-11-19 19:50 | 1.6K | |
| main.c | 2024-11-19 19:50 | 9.7K | |
| main.c.pysam.c | 2024-11-19 19:50 | 9.9K | |
| mcall.c | 2024-11-19 19:50 | 63K | |
| mcall.c.pysam.c | 2024-11-19 19:50 | 64K | |
| mpileup.c | 2024-11-19 19:50 | 74K | |
| mpileup.c.pysam.c | 2024-11-19 19:50 | 74K | |
| mw.h | 2024-11-19 19:50 | 61K | |
| ploidy.c | 2024-11-19 19:50 | 7.9K | |
| ploidy.c.pysam.c | 2024-11-19 19:50 | 8.0K | |
| ploidy.h | 2024-11-19 19:50 | 4.3K | |
| prob1.c | 2024-11-19 19:50 | 20K | |
| prob1.c.pysam.c | 2024-11-19 19:50 | 20K | |
| prob1.h | 2024-11-19 19:50 | 3.5K | |
| rbuf.h | 2024-11-19 19:50 | 7.4K | |
| read_consensus.c | 2024-11-19 19:50 | 29K | |
| read_consensus.c.pysam.c | 2024-11-19 19:50 | 29K | |
| read_consensus.h | 2024-11-19 19:50 | 2.3K | |
| regidx.c | 2024-11-19 19:50 | 18K | |
| regidx.c.pysam.c | 2024-11-19 19:50 | 18K | |
| regidx.h | 2024-11-19 19:50 | 8.5K | |
| reheader.c | 2024-11-19 19:50 | 27K | |
| reheader.c.pysam.c | 2024-11-19 19:50 | 27K | |
| smpl_ilist.c | 2024-11-19 19:50 | 5.1K | |
| smpl_ilist.c.pysam.c | 2024-11-19 19:50 | 5.2K | |
| smpl_ilist.h | 2024-11-19 19:50 | 2.2K | |
| str_finder.c | 2024-11-19 19:50 | 7.4K | |
| str_finder.c.pysam.c | 2024-11-19 19:50 | 7.4K | |
| str_finder.h | 2024-11-19 19:50 | 2.2K | |
| tabix.c | 2024-11-19 19:50 | 5.6K | |
| tabix.c.pysam.c | 2024-11-19 19:50 | 5.7K | |
| tsv2vcf.c | 2024-11-19 19:50 | 3.8K | |
| tsv2vcf.c.pysam.c | 2024-11-19 19:50 | 3.9K | |
| tsv2vcf.h | 2024-11-19 19:50 | 2.7K | |
| utlist.h | 2024-11-19 19:50 | 55K | |
| variantkey.h | 2024-11-19 19:50 | 22K | |
| vcfannotate.c | 2024-11-19 19:50 | 154K | |
| vcfannotate.c.pysam.c | 2024-11-19 19:50 | 154K | |
| vcfbuf.c | 2024-11-19 19:50 | 17K | |
| vcfbuf.c.pysam.c | 2024-11-19 19:50 | 17K | |
| vcfbuf.h | 2024-11-19 19:50 | 4.2K | |
| vcfcall.c | 2024-11-19 19:50 | 48K | |
| vcfcall.c.pysam.c | 2024-11-19 19:50 | 49K | |
| vcfcnv.c | 2024-11-19 19:50 | 58K | |
| vcfcnv.c.pysam.c | 2024-11-19 19:50 | 58K | |
| vcfconcat.c | 2024-11-19 19:50 | 50K | |
| vcfconcat.c.pysam.c | 2024-11-19 19:50 | 51K | |
| vcfconvert.c | 2024-11-19 19:50 | 72K | |
| vcfconvert.c.pysam.c | 2024-11-19 19:50 | 73K | |
| vcffilter.c | 2024-11-19 19:50 | 31K | |
| vcffilter.c.pysam.c | 2024-11-19 19:50 | 31K | |
| vcfgtcheck.c | 2024-11-19 19:50 | 53K | |
| vcfgtcheck.c.pysam.c | 2024-11-19 19:50 | 53K | |
| vcfhead.c | 2024-11-19 19:50 | 4.0K | |
| vcfhead.c.pysam.c | 2024-11-19 19:50 | 4.1K | |
| vcfindex.c | 2024-11-19 19:50 | 12K | |
| vcfindex.c.pysam.c | 2024-11-19 19:50 | 12K | |
| vcfisec.c | 2024-11-19 19:50 | 29K | |
| vcfisec.c.pysam.c | 2024-11-19 19:50 | 29K | |
| vcfmerge.c | 2024-11-19 19:50 | 144K | |
| vcfmerge.c.pysam.c | 2024-11-19 19:50 | 145K | |
| vcfnorm.c | 2024-11-19 19:50 | 102K | |
| vcfnorm.c.pysam.c | 2024-11-19 19:50 | 102K | |
| vcfplugin.c | 2024-11-19 19:50 | 28K | |
| vcfplugin.c.pysam.c | 2024-11-19 19:50 | 28K | |
| vcfquery.c | 2024-11-19 19:50 | 18K | |
| vcfquery.c.pysam.c | 2024-11-19 19:50 | 18K | |
| vcfroh.c | 2024-11-19 19:50 | 50K | |
| vcfroh.c.pysam.c | 2024-11-19 19:50 | 50K | |
| vcfsom.c | 2024-11-19 19:50 | 24K | |
| vcfsom.c.pysam.c | 2024-11-19 19:50 | 24K | |
| vcfsort.c | 2024-11-19 19:50 | 15K | |
| vcfsort.c.pysam.c | 2024-11-19 19:50 | 15K | |
| vcfstats.c | 2024-11-19 19:50 | 83K | |
| vcfstats.c.pysam.c | 2024-11-19 19:50 | 86K | |
| vcfview.c | 2024-11-19 19:50 | 38K | |
| vcfview.c.pysam.c | 2024-11-19 19:50 | 39K | |
| vcmp.c | 2024-11-19 19:50 | 4.4K | |
| vcmp.c.pysam.c | 2024-11-19 19:50 | 4.5K | |
| vcmp.h | 2024-11-19 19:50 | 2.4K | |
| version.c | 2024-11-19 19:50 | 4.9K | |
| version.c.pysam.c | 2024-11-19 19:50 | 5.0K | |
| version.sh | 2024-11-19 19:50 | 1.5K | |