Index of /ensembl-vep/Bio/EnsEMBL/Funcgen/RunnableDB/PeakCalling

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]AlignFastqFile.pm2023-01-05 08:43 6.4K 
[TXT]BrIdrComputePeakCallingInputs.pm2023-01-05 08:43 1.2K 
[TXT]CallPeaks.pm2023-01-05 08:43 7.4K 
[TXT]CheckAlignmentsToYChromosome.pm2023-01-05 08:43 1.5K 
[TXT]CheckExecutionPlans.pm2023-01-05 08:43 1.2K 
[TXT]ComputeIdrPerExperiment.pm2023-01-05 08:43 960  
[TXT]ConvertBamToBed.pm2023-01-05 08:43 3.2K 
[TXT]CreateExecutionPlan.pm2023-01-05 08:43 3.3K 
[TXT]FindControlExperiments.pm2023-01-05 08:43 3.9K 
[TXT]IdrPeakThreshold.pm2023-01-05 08:43 3.4K 
[TXT]MergeBamFiles.pm2023-01-05 08:43 1.6K 
[TXT]NoIdrComputePeakCallingInputs.pm2023-01-05 08:43 810  
[TXT]PrePipelineChecks.pm2023-01-05 08:43 17K 
[TXT]QcChanceJobFactory.pm2023-01-05 08:43 5.4K 
[TXT]QcComputeProportionOfReadsInPeaks.pm2023-01-05 08:43 2.3K 
[TXT]QcFastQcJobFactory.pm2023-01-05 08:43 1.8K 
[TXT]QcFastQcLoaderJobFactory.pm2023-01-05 08:43 1.1K 
[TXT]QcFlagstatsJobFactory.pm2023-01-05 08:43 2.4K 
[TXT]QcPhantomPeaksJobFactory.pm2023-01-05 08:43 2.0K 
[TXT]QcProportionOfReadsInPeaksJobFactory.pm2023-01-05 08:43 2.0K 
[TXT]QcRunFastqc.pm2023-01-05 08:43 1.7K 
[TXT]QcStoreProportionOfReadsInPeaks.pm2023-01-05 08:43 1.2K 
[TXT]RegisterAlignment.pm2023-01-05 08:43 6.1K 
[TXT]RegisterSignal.pm2023-01-05 08:43 1.8K 
[TXT]RemoveDuplicates.pm2023-01-05 08:43 1.7K 
[TXT]RunIDR.pm2023-01-05 08:43 9.1K 
[TXT]RunPermissiveSWEmbl.pm2023-01-05 08:43 1.5K 
[TXT]SeedAllAlignments.pm2023-01-05 08:43 682  
[TXT]SeedAllControlExperimentNames.pm2023-01-05 08:43 1.3K 
[TXT]SeedAllExecutionPlans.pm2023-01-05 08:43 772  
[TXT]SeedAllPeakCallingsFromExperiment.pm2023-01-05 08:43 590  
[TXT]SeedAllSignalExperimentNames.pm2023-01-05 08:43 847  
[TXT]SeedBigWigControlJobs.pm2023-01-05 08:43 1.6K 
[TXT]SeedBigWigJobs.pm2023-01-05 08:43 1.6K 
[TXT]SeedIdrAlignments.pm2023-01-05 08:43 619  
[TXT]SeedPairwise.pm2023-01-05 08:43 1.8K 
[TXT]SeedSignalAlignments.pm2023-01-05 08:43 1.8K 
[TXT]SeedSignalProcessing.pm2023-01-05 08:43 851  
[TXT]SeedSwemblRuns.pm2023-01-05 08:43 1.1K 
[TXT]SplitByIdrStrategy.pm2023-01-05 08:43 1.4K 
[TXT]SplitExperimentReads.pm2023-01-05 08:43 2.0K 
[TXT]SplitFastq.pm2023-01-05 08:43 7.7K 
[TXT]StoreNoIdr.pm2023-01-05 08:43 1.9K 
[TXT]StorePeaks.pm2023-01-05 08:43 5.9K 
[TXT]WriteBigWig.pm2023-01-05 08:43 3.5K 
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