Name | Last modified | Size | Description | |
---|---|---|---|---|
Parent Directory | - | |||
auxf#values.sam | 2023-10-27 19:32 | 751 | ||
auxf#values_java.cram | 2023-10-27 19:32 | 5.0K | ||
auxf.fa | 2023-10-27 19:32 | 29 | ||
auxf.fa.fai | 2023-10-27 19:32 | 18 | ||
bgziptest.txt | 2023-10-27 19:32 | 15 | ||
bgziptest.txt.gz | 2023-10-27 19:32 | 181 | ||
bgziptest.txt.gz.gzi | 2023-10-27 19:32 | 88 | ||
c1#bounds.sam | 2023-10-27 19:32 | 148 | ||
c1#clip.sam | 2023-10-27 19:32 | 337 | ||
c1#noseq.sam | 2023-10-27 19:32 | 433 | ||
c1#pad1.sam | 2023-10-27 19:32 | 388 | ||
c1#pad2.sam | 2023-10-27 19:32 | 527 | ||
c1#pad3.sam | 2023-10-27 19:32 | 665 | ||
c1#unknown.sam | 2023-10-27 19:32 | 429 | ||
c1.fa | 2023-10-27 19:32 | 15 | ||
c1.fa.fai | 2023-10-27 19:32 | 14 | ||
c2#pad.sam | 2023-10-27 19:32 | 847 | ||
c2.fa | 2023-10-27 19:32 | 14 | ||
c2.fa.fai | 2023-10-27 19:32 | 12 | ||
ce#1.sam | 2023-10-27 19:32 | 341 | ||
ce#2.sam | 2023-10-27 19:32 | 645 | ||
ce#5.sam | 2023-10-27 19:32 | 1.8K | ||
ce#5b.sam | 2023-10-27 19:32 | 1.8K | ||
ce#5b_java.cram | 2023-10-27 19:32 | 6.6K | ||
ce#1000.sam | 2023-10-27 19:32 | 315K | ||
ce#large_seq.sam | 2023-10-27 19:32 | 2.0M | ||
ce#supp.sam | 2023-10-27 19:32 | 547 | ||
ce#tag_depadded.sam | 2023-10-27 19:32 | 1.6K | ||
ce#tag_padded.sam | 2023-10-27 19:32 | 1.6K | ||
ce#unmap.sam | 2023-10-27 19:32 | 1.3K | ||
ce#unmap1.sam | 2023-10-27 19:32 | 2.7K | ||
ce#unmap2.sam | 2023-10-27 19:32 | 5.4K | ||
ce.fa | 2023-10-27 19:32 | 1.0M | ||
ce.fa.fai | 2023-10-27 19:32 | 230 | ||
compare_sam.pl | 2023-10-27 19:32 | 5.6K | ||
cross_validate.sh | 2023-10-27 19:32 | 3.1K | ||
faidx.fa | 2023-10-27 19:32 | 289 | ||
fastqs.fq | 2023-10-27 19:32 | 47K | ||
fastqs_README.txt | 2023-10-27 19:32 | 4.8K | ||
fieldarith | 2023-10-27 19:32 | 1.8M | ||
fieldarith.c | 2023-10-27 19:32 | 2.4K | ||
fieldarith.o | 2023-10-27 19:32 | 18K | ||
fieldarith.sam | 2023-10-27 19:32 | 916 | ||
formatcols.vcf | 2023-10-27 19:32 | 240 | ||
formatmissing-out.vcf | 2023-10-27 19:32 | 226 | ||
formatmissing.vcf | 2023-10-27 19:32 | 226 | ||
hfile | 2023-10-27 19:32 | 1.8M | ||
hfile.c | 2023-10-27 19:32 | 10K | ||
hfile.o | 2023-10-27 19:32 | 77K | ||
hts_endian | 2023-10-27 19:32 | 68K | ||
hts_endian.c | 2023-10-27 19:32 | 17K | ||
hts_endian.o | 2023-10-27 19:32 | 121K | ||
md#1.sam | 2023-10-27 19:32 | 1.0K | ||
md.fa | 2023-10-27 19:32 | 45 | ||
md.fa.fai | 2023-10-27 19:32 | 13 | ||
noroundtrip-out.vcf | 2023-10-27 19:32 | 325 | ||
noroundtrip.vcf | 2023-10-27 19:32 | 271 | ||
range.bam | 2023-10-27 19:32 | 13K | ||
range.bam.bai | 2023-10-27 19:32 | 360 | ||
range.cram | 2023-10-27 19:32 | 11K | ||
range.cram.crai | 2023-10-27 19:32 | 94 | ||
range.out | 2023-10-27 19:32 | 3.4K | ||
realn01.fa | 2023-10-27 19:32 | 719 | ||
realn01.fa.fai | 2023-10-27 19:32 | 21 | ||
realn01.sam | 2023-10-27 19:32 | 1.8K | ||
realn01_exp-a.sam | 2023-10-27 19:32 | 2.1K | ||
realn01_exp-e.sam | 2023-10-27 19:32 | 2.1K | ||
realn01_exp.sam | 2023-10-27 19:32 | 2.1K | ||
realn02-r.sam | 2023-10-27 19:32 | 3.7K | ||
realn02.fa | 2023-10-27 19:32 | 4.2K | ||
realn02.fa.fai | 2023-10-27 19:32 | 17 | ||
realn02.sam | 2023-10-27 19:32 | 2.8K | ||
realn02_exp-a.sam | 2023-10-27 19:32 | 3.7K | ||
realn02_exp-e.sam | 2023-10-27 19:32 | 3.7K | ||
realn02_exp.sam | 2023-10-27 19:32 | 3.7K | ||
sam | 2023-10-27 19:32 | 1.8M | ||
sam.c | 2023-10-27 19:32 | 22K | ||
sam.o | 2023-10-27 19:32 | 83K | ||
tabix/ | 2023-10-27 19:32 | - | ||
test-bcf-sr | 2023-10-27 19:32 | 2.3M | ||
test-bcf-sr.c | 2023-10-27 19:32 | 4.8K | ||
test-bcf-sr.o | 2023-10-27 19:32 | 45K | ||
test-bcf-sr.pl | 2023-10-27 19:32 | 16K | ||
test-bcf-translate | 2023-10-27 19:32 | 2.2M | ||
test-bcf-translate.c | 2023-10-27 19:32 | 8.4K | ||
test-bcf-translate.o | 2023-10-27 19:32 | 28K | ||
test-bcf-translate.out | 2023-10-27 19:32 | 869 | ||
test-logging.pl | 2023-10-27 19:32 | 2.5K | ||
test-regidx | 2023-10-27 19:32 | 1.8M | ||
test-regidx.c | 2023-10-27 19:32 | 4.2K | ||
test-regidx.o | 2023-10-27 19:32 | 23K | ||
test-vcf-api | 2023-10-27 19:32 | 2.2M | ||
test-vcf-api.c | 2023-10-27 19:32 | 13K | ||
test-vcf-api.o | 2023-10-27 19:32 | 65K | ||
test-vcf-api.out | 2023-10-27 19:32 | 1.9K | ||
test-vcf-hdr-in.vcf | 2023-10-27 19:32 | 2.0K | ||
test-vcf-hdr.out | 2023-10-27 19:32 | 1.3K | ||
test-vcf-sweep | 2023-10-27 19:32 | 2.2M | ||
test-vcf-sweep.c | 2023-10-27 19:32 | 3.7K | ||
test-vcf-sweep.o | 2023-10-27 19:32 | 19K | ||
test-vcf-sweep.out | 2023-10-27 19:32 | 92 | ||
test.pl | 2023-10-27 19:32 | 16K | ||
test_bgzf | 2023-10-27 19:32 | 1.8M | ||
test_bgzf.c | 2023-10-27 19:32 | 24K | ||
test_bgzf.o | 2023-10-27 19:32 | 106K | ||
test_realn | 2023-10-27 19:32 | 1.8M | ||
test_realn.c | 2023-10-27 19:32 | 4.9K | ||
test_realn.o | 2023-10-27 19:32 | 30K | ||
test_view | 2023-10-27 19:32 | 1.8M | ||
test_view.c | 2023-10-27 19:32 | 12K | ||
test_view.o | 2023-10-27 19:32 | 89K | ||
thrash_threads1.c | 2023-10-27 19:32 | 1.6K | ||
thrash_threads2.c | 2023-10-27 19:32 | 1.6K | ||
thrash_threads3.c | 2023-10-27 19:32 | 1.7K | ||
thrash_threads4.c | 2023-10-27 19:32 | 2.2K | ||
thrash_threads5.c | 2023-10-27 19:32 | 2.1K | ||
thrash_threads6.c | 2023-10-27 19:32 | 3.3K | ||
thread_pool.md | 2023-10-27 19:32 | 2.9K | ||
xx#blank.sam | 2023-10-27 19:32 | 0 | ||
xx#large_aux.sam | 2023-10-27 19:32 | 884K | ||
xx#large_aux2.sam | 2023-10-27 19:32 | 651 | ||
xx#large_aux_java.cram | 2023-10-27 19:32 | 22K | ||
xx#minimal.sam | 2023-10-27 19:32 | 254 | ||
xx#pair.sam | 2023-10-27 19:32 | 304 | ||
xx#repeated.sam | 2023-10-27 19:32 | 298 | ||
xx#rg.sam | 2023-10-27 19:32 | 517 | ||
xx#tlen.sam | 2023-10-27 19:32 | 1.0K | ||
xx#tlen2.sam | 2023-10-27 19:32 | 1.1K | ||
xx#triplet.sam | 2023-10-27 19:32 | 267 | ||
xx#unsorted.sam | 2023-10-27 19:32 | 320 | ||
xx.fa | 2023-10-27 19:32 | 51 | ||
xx.fa.fai | 2023-10-27 19:32 | 29 | ||