1 \N schema_type core 2 \N schema_version 109 3 \N patch patch_65_66_a.sql|schema_version 4 \N patch patch_65_66_b.sql|fix_external_db_id 5 \N patch patch_65_66_c.sql|reorder_unmapped_obj_index 6 1 assembly.coverage_depth high 7 1 assembly.date 2012-01 8 1 assembly.default GRCm38 9 1 assembly.name GRCm38.p4 10 1 genebuild.id 42 11 1 genebuild.start_date 2012-01-Ensembl 12 1 repeat.analysis repeatmask 13 1 repeat.analysis dust 14 1 repeat.analysis trf 15 1 assembly.accession GCA_000001635.6 1799 1 species.taxonomy_id 10090 1800 1 species.common_name house mouse 48 1 assembly.mapping scaffold:GRCm38#contig 49 1 assembly.mapping chromosome:GRCm38|scaffold:GRCm38 50 1 assembly.mapping chromosome:GRCm38#contig 1798 1 species.stable_id_prefix ENSMUS 1831 1 species.production_name mus_muscuvep 1830 1 species.scientific_name Mus muscuvep 428 1 assembly.mapping chromosome:GRCm38#chromosome:NCBIM37 429 1 assembly.mapping scaffold:GRCm38#supercontig:NCBIM37 430 1 assembly.mapping chromosome:NCBIM37#supercontig:NCBIM37 431 1 assembly.mapping chromosome:GRCm38#chromosome:NCBIM36 432 1 liftover.mapping chromosome:GRCm38#chromosome:NCBIM37 433 1 liftover.mapping chromosome:GRCm38#chromosome:NCBIM36 1789 1 species.alias mus 435 1 genebuild.havana_datafreeze_date 20-10-2015 437 1 genebuild.initial_release_date 2012-07 438 1 genebuild.last_geneset_update 2016-01 439 1 genebuild.method full_genebuild 1725 1 genebuild.level toplevel 1726 1 transcriptbuild.level toplevel 1727 1 exonbuild.level toplevel 1728 1 repeat_featurebuild.level toplevel 1729 1 dna_align_featurebuild.level toplevel 1730 1 protein_align_featurebuild.level toplevel 1731 1 prediction_transcriptbuild.level toplevel 1732 1 prediction_exonbuild.level toplevel 449 \N patch patch_66_67_c.sql|adding_intron_supporting_evidence 450 \N patch patch_66_67_a.sql|schema_version 451 \N patch patch_66_67_b.sql|drop_stable_id_views 452 \N patch patch_66_67_d.sql|adding_gene_transcript_annotated 453 \N patch patch_66_67_e.sql|index_canonical_transcript_id 454 \N patch patch_65_66_d.sql|add_index_to_ontology_xref_table 455 \N patch patch_65_66_e.sql|fix_external_db_id_in_xref 456 \N patch patch_65_66_f.sql|drop_default_values 457 \N patch patch_67_68_a.sql|schema_version 1801 1 species.display_name Mouse 1832 1 species.url Mus_muscuvep 503 1 assembly.web_accession_type GenBank Assembly ID 504 1 assembly.web_accession_source NCBI 505 \N patch patch_67_68_b.sql|xref_uniqueness 1785 1 xref.timestamp 2016-01-21 20:07:25 507 \N patch patch_67_68_c.sql|altering_intron_supporting_evidence 508 \N patch patch_67_68_d.sql|add_is_splice_canonical_and_seq_index 556 1 removed_evidence_flag.ensembl_dbversion homo_sapiens_core_84_38 557 \N patch patch_67_68_e.sql|fix_67_68_e_xref_index 558 1 removed_evidence_flag.uniprot_dbversion uniprot_2016_01 559 \N patch patch_68_69_a.sql|schema_version 744 1 assembly.long_name Genome Reference Consortium Mouse Reference 38 677 \N patch patch_69_70_a.sql|schema_version 678 \N patch patch_69_70_b.sql|add_mapping_set_history 679 \N patch patch_69_70_c.sql|column_datatype_consistency 680 \N patch patch_69_70_d.sql|data_file_id_auto_increment 681 \N patch patch_69_70_e.sql|protein_feature_hit_description 745 \N patch patch_70_71_a.sql|schema_version 746 \N patch patch_70_71_b.sql|mapping_set_index 812 \N patch patch_71_72_a.sql|schema_version 813 \N patch patch_71_72_b.sql|associated_xref 868 \N patch patch_72_73_a.sql|schema_version 914 \N patch patch_72_73_b.sql|alt_allele_type 915 \N patch patch_72_73_c.sql|add_object_type_marker 981 \N patch patch_73_74_a.sql|schema_version 982 \N patch patch_73_74_b.sql|remove_dnac 983 \N patch patch_73_74_c.sql|remove_unconventional_transcript_association 984 \N patch patch_73_74_d.sql|remove_qtl 985 \N patch patch_73_74_e.sql|remove_canonical_annotation 986 \N patch patch_73_74_f.sql|remove_pair_dna_align 987 \N patch patch_73_74_g.sql|add_transcript_idx_tise 1124 \N patch patch_73_74_h.sql|alt_allele_unique_gene_idx 1125 \N patch patch_74_75_a.sql|schema_version 1126 \N patch patch_74_75_b.sql|transcript_source 1127 \N patch patch_74_75_c.sql|add_genome_statistics 1173 \N patch patch_74_75_d.sql|default_transcript_source 1174 \N patch patch_74_75_e.sql|unique_attrib_key 1175 1 gencode.version GENCODE M9 1176 \N patch patch_74_75_f.sql|longer_code 1196 \N patch patch_75_76_a.sql|schema_version 1197 \N patch patch_75_76_b.sql|allow_null_karyotype 1198 \N patch patch_75_76_c.sql|remove_alternative_splicing 1794 1 species.alias mus muscuvep 1809 1 species.classification Euarchontoglires 1258 \N patch patch_76_77_a.sql|schema_version 1810 1 species.classification Boreoeutheria 1342 \N patch patch_77_78_a.sql|schema_version 1343 \N patch patch_77_78_b.sql|source_column_increase 1390 1 assembly.ucsc_alias mm10 1393 \N patch patch_77_78_c.sql|Change unmapped_reason_id from smallint to int 1394 \N patch patch_78_79_a.sql|schema_version 1792 1 species.alias mus_muscuvep 1811 1 species.classification Eutheria 1441 \N patch patch_78_79_b.sql|bamcov support 1458 \N patch patch_79_80_a.sql|schema_version 1459 \N patch patch_79_80_b.sql|xref_dbprimary_acc_longer 1460 \N patch patch_79_80_c.sql|seq_region_synonym_longer 1812 1 species.classification Theria 1813 1 species.classification Mammalia 1507 \N patch patch_79_80_d.sql|genome_statistics_value_longer 1542 \N patch patch_80_81_a.sql|schema_version 1787 1 species.alias mmus 1807 1 species.classification Rodentia 1808 1 species.classification Glires 1609 \N patch patch_81_82_a.sql|schema_version 1610 \N patch patch_81_82_b.sql|xref_width 1611 \N patch patch_81_82_c.sql|seq_synonym_key 1788 1 species.alias 10090 1819 1 species.classification Teleostomi 1816 1 species.classification Dipnotetrapodomorpha 1817 1 species.classification Sarcopterygii 1660 1 species.division EnsemblVertebrates 1672 \N patch patch_82_83_a.sql|schema_version 1790 1 species.alias m_muscuvep 1802 1 species.classification Mus muscuvep 1803 1 species.classification Murinae 1804 1 species.classification Muridae 1805 1 species.classification Muroidea 1806 1 species.classification Sciurognathi 1735 \N patch patch_83_84_a.sql|schema_version 1736 \N patch patch_83_84_b.sql|xref.version_default 1737 \N patch patch_83_84_c.sql|protein_feature_unique 1738 \N patch patch_83_84_d.sql|longer_synonym 1793 1 species.alias musmus 1791 1 species.alias mmuscuvep 1820 1 species.classification Gnathostomaa 1821 1 species.classification Vertebrata 1818 1 species.classification Euteleostomi 1814 1 species.classification Amniota 1815 1 species.classification Tetrapoda 1786 \N patch patch_83_84_e.sql|nullable_versions 1795 1 species.alias ensmm 1796 1 species.alias mouse 1797 1 species.alias house mouse 1822 1 species.classification Craniata 1823 1 species.classification Chordata 1824 1 species.classification Deuterostomia 1825 1 species.classification Bilateria 1826 1 species.classification Eumetazoa 1827 1 species.classification Metazoa 1828 1 species.classification Opisthokonta 1829 1 species.classification Eukaryota 1833 \N patch patch_84_85_a.sql|schema_version 1834 \N patch patch_84_85_b.sql|remove_duplicated_key 1835 \N patch patch_85_86_a.sql|schema_version 1836 \N patch patch_85_86_b.sql|add dna_align_feature_attrib table 1837 \N patch patch_85_86_c.sql|meta_case_insensitive 1838 \N patch patch_86_87_a.sql|schema_version 1839 \N patch patch_86_87_b.sql|meta_value_NOT_NULL 1840 \N patch patch_86_87_c.sql|datetime_default_NULL 1841 \N patch patch_87_88_a.sql|schema_version 1842 \N patch patch_87_88_b.sql|seq_region_name_255 1843 \N patch patch_87_88_c.sql|protein_featue_uniqueness 1844 \N patch patch_88_89_a.sql|schema_version 1845 \N patch patch_89_90_a.sql|schema_version 1846 \N patch patch_89_90_b.sql|remove_status 1847 \N patch patch_89_90_c.sql|pf_hit_name_case_sensitive 1848 \N patch patch_90_91_a.sql|schema_version 1849 \N patch patch_90_91_b.sql|align_type 1850 \N patch patch_90_91_c.sql|protein_align_type 1851 \N patch patch_90_91_d.sql|remove_external_data 1852 \N patch patch_91_92_a.sql|schema_version 1853 \N patch patch_91_92_b.sql|add_cigar_line_align_type 1854 \N patch patch_92_93_a.sql|schema_version 1855 \N patch patch_92_93_b.sql|biotype_table 1856 \N patch patch_92_93_c.sql|collate_index_interpro 1857 \N patch patch_93_94_a.sql|schema_version 1858 \N patch patch_93_94_b.sql|nullable_ox_analysis 1859 \N patch patch_93_94_c.sql|default_aln_type 1860 \N patch patch_94_95_a.sql|schema_version 1861 \N patch patch_94_95_b.sql|vertebrate_division_rename 1862 \N patch patch_95_96_a.sql|schema_version 1863 \N patch patch_96_97_a.sql|schema_version 1864 \N patch patch_96_97_b.sql|biotype_so_term 1865 \N patch patch_96_97_c.sql|rnaproduct_tables 1866 \N patch patch_96_97_d.sql|add_object_type_rnaproduct 1867 \N patch patch_96_97_e.sql|add_stable_id_event_type_rnaproduct 1868 \N patch patch_97_98_a.sql|schema_version 1869 \N patch patch_98_99_a.sql|schema_version 1870 \N patch patch_99_100_a.sql|schema_version 1871 \N patch patch_99_100_b.sql|alter_externaldb_type_notnull 1872 \N patch patch_99_100_c.sql|alter_mapping_session_assembly_length 1873 \N patch patch_100_101_a.sql|schema_version 1874 \N patch patch_101_102_a.sql|schema_version 1875 \N patch patch_102_103_a.sql|schema_version 1876 \N patch patch_103_104_a.sql|schema_version 1877 \N patch patch_104_105_a.sql|schema_version 1878 \N patch patch_105_106_a.sql|schema_version 1879 \N patch patch_106_107_a.sql|schema_version 1880 \N patch patch_106_107_b.sql|Added index for seq_region_mapping 1881 \N patch patch_107_108_a.sql|schema_version 1882 \N patch patch_108_109_a.sql|schema_version 1883 \N patch patch_108_109_b.sql|Added xref source GeneCards into external_db